DEXSeq is an extension of DESeq2 for the analysis of alternative exon usage. DESeq2 is an R/Bioconductor package for differential expression analysis of high-throughput sequencing assays (incl. RNA-seq, ChIP-Seq, 4C-Seq, ribosome profiling, CLIP, metagenomics, HT-CRISPR screens) based on the Gamma-Poisson distribution.

Homepage

http://bioconductor.org/packages/DEXseq/

Contact

Wolfgang Huber (wolfgang.huber (at) embl (dot) de)
Mike Smith