DESeq2 is an R/Bioconductor package for differential expression analysis of high-throughput sequencing assays based on the Gamma-Poisson distribution. The package can be used for differential analysis of data from RNA-seq, ChIP-Seq, 4C-Seq, ribosome profiling, CLIP, metagenomics, HT-CRISPR screens, etc.

Homepage

http://bioconductor.org/packages/release/bioc/html/DESeq2.html

Contact

Wolfgang Huber (wolfgang.huber (at) embl (dot) de)
Mike Smith